mkt.databases.plot_config.UpsetPlotConfig

class mkt.databases.plot_config.UpsetPlotConfig(figsize: list[float] = <factory>, dict_colors: dict = <factory>, element_size: float | None = None, intersection_plot_elements: int = 6, totals_plot_elements: int = 2, tighten_totals_gap: bool = False, totals_gap_margin: float = 0.01, cap_intersection_ylim: bool = False, pct_label_fontsize: int = 8, count_label_fontsize: int = 8, filename: str = 'upset_plot')[source]

Bases: object

Aesthetics for the KinaseInfo source-coverage upset plot.

Defaults reproduce the original (pre-config) figure for backwards compatibility. Use preprint_2026() for the smaller publication size.

__init__(figsize: list[float] = <factory>, dict_colors: dict = <factory>, element_size: float | None = None, intersection_plot_elements: int = 6, totals_plot_elements: int = 2, tighten_totals_gap: bool = False, totals_gap_margin: float = 0.01, cap_intersection_ylim: bool = False, pct_label_fontsize: int = 8, count_label_fontsize: int = 8, filename: str = 'upset_plot') → None

Methods

`__eq__`(other)	Return self==value.
`__init__`([figsize, dict_colors, ...])
`preprint_2026`()	~5 x 3.5 in plot-area variant for the 2026 preprint figures.

Attributes

`__dataclass_fields__`
`__dataclass_params__`
`__match_args__`
`cap_intersection_ylim`
`count_label_fontsize`
`element_size`
`filename`
`intersection_plot_elements`
`pct_label_fontsize`
`tighten_totals_gap`
`totals_gap_margin`
`totals_plot_elements`
`figsize`
`dict_colors`

__init__(figsize: list[float] = <factory>, dict_colors: dict = <factory>, element_size: float | None = None, intersection_plot_elements: int = 6, totals_plot_elements: int = 2, tighten_totals_gap: bool = False, totals_gap_margin: float = 0.01, cap_intersection_ylim: bool = False, pct_label_fontsize: int = 8, count_label_fontsize: int = 8, filename: str = 'upset_plot') → None

cap_intersection_ylim: bool = False

count_label_fontsize: int = 8

dict_colors: dict

element_size: float | None = None

figsize: list[float]

filename: str = 'upset_plot'

intersection_plot_elements: int = 6

pct_label_fontsize: int = 8

classmethod preprint_2026() → UpsetPlotConfig[source]

~5 x 3.5 in plot-area variant for the 2026 preprint figures.

element_size is tuned empirically (with intersection_plot_elements / totals_plot_elements) so the upset grid renders ~5 x 3.5 in rather than the near-square default; the figure is saved tight-cropped.

tighten_totals_gap: bool = False

totals_gap_margin: float = 0.01

totals_plot_elements: int = 2