mkt.databases.conservation._build_klifs_panel

mkt.databases.conservation._build_klifs_panel(dict_kinase: dict = {}, int_length: int = 85) → tuple[list[str], list[str], list[str]]

Collect the gapless KLIFS pocket panel for hierarchical clustering.

Iterates DICT_KINASE, keeping kinases with a valid fixed-width pocket string and recording their Manning group for the concordance check. Kinases without a pocket, or whose pocket is the wrong length, are skipped with a log warning.

Parameters:

dict_kinasedict

Mapping of HGNC name to KinaseInfo (default: DICT_KINASE).

int_lengthint

Required pocket length (default: INT_KLIFS_POCKET_LENGTH).

Returns:

tuple[list[str], list[str], list[str]]

Parallel lists of (names, pockets, manning_groups).