mkt.databases.klifs.KinaseNames

class mkt.databases.klifs.KinaseNames(species: str | None = 'Human')[source]

Class to get kinase names from KLIFS.

__init__(species: str | None = 'Human') → None[source]

Initialize KinaseNames Class object.

Upon initialization, KLIFS API is queried and kinase names are retrieved.

Parameters:

species (str) – Species of the kinase; default “Human” but can also be “Mouse”
_kinase_names (dict[str, dict[str, str | int]] | None) – Llist of dictionaries of all kinase names info from KLIFS

Variables:

_kinase_names (list[str]) – List of kinase names

Methods

`__eq__`(other)	Return self==value.
`__init__`([species])	Initialize KinaseNames Class object.
`_stamp_from_response`(res)	Record query datetime + cache provenance from a requests-cache response.
`_stamp_now`()	Record current UTC datetime; cache provenance unknown.
`check_response`(res)	Check the response status code for errors.
`get_kinase_names`()	Get kinase names from KLIFS query.
`get_klifs`()	Get KLIFS API object.
`get_url`()	Get KLIFS API URL.
`query_api`()	Get KLIFS API as bravado.client.SwaggerClient object.
`query_kinase_names`()	Get kinase names from KLIFS.

Attributes

`__dataclass_fields__`
`__dataclass_params__`
`__match_args__`
`from_cache`	Whether the most recent response was served from requests-cache.
`query_datetime`	UTC datetime the underlying network query was made (cache creation time if served from cache).