mkt.databases.pssm
==================

.. automodule:: mkt.databases.pssm
   :members:
   :undoc-members:
   :show-inheritance:


   
   
   .. rubric:: Module Attributes

   .. autosummary::
      :toctree:
   
      STR_AA20
      DICT_AA20_INDEX
      STR_GAP_CHARS
      ARR_SWISSPROT_BG
   
   

   
   
   .. rubric:: Functions

   .. autosummary::
      :toctree:
   
      column_conservation
      column_counts
      column_information_content
      consurf_grade_boundaries
      consurf_grades
      henikoff_weights
   
   

   
   
   .. rubric:: Classes

   .. autosummary::
      :toctree:
      :template: custom-class-template.rst
   
      SubstitutionPseudocounts