mkt.databases.conservation
==========================

.. automodule:: mkt.databases.conservation
   :members:
   :undoc-members:
   :show-inheritance:


   
   
   .. rubric:: Module Attributes

   .. autosummary::
      :toctree:
   
      INT_KLIFS_POCKET_LENGTH
      FLOAT_CONSERVATION_THRESHOLD
      INT_MIN_CHILD_MEMBERS
      INT_TREE_MIN_CLUSTER_DISPLAY
      STR_FILE_CONSERVATION_TREE
      TUP_TREE_PAGE
      FLOAT_TREE_FONT_SIZE
      FLOAT_TREE_ROW_HEIGHT
      FLOAT_TREE_BOX_PAD_IN
      FLOAT_TREE_BOX_GAP_IN
      FLOAT_TREE_TABLE_GAP_IN
      FLOAT_TREE_RIGHT_PAD_IN
      FLOAT_TREE_DEPTH_STEP_IN
      FLOAT_TREE_DOMINANT_FRACTION
      FLOAT_TREE_BRANCH_LW
      FLOAT_TREE_PSEUDO_BORDER_LW
      FLOAT_TREE_GUIDE_LW
      STR_FILE_CONSERVATION_TREE_SUMMARY
      STR_FILE_CONSERVATION_TREE_TOP
      STR_FILE_CONSERVATION_TREE_BOTTOM
      FLOAT_TREE_SPLIT_FONT_SIZE
      FLOAT_TREE_DETAIL_PAGE_W
      FLOAT_TREE_DETAIL_ROW_IN
      FLOAT_TREE_DETAIL_LEGEND_IN
      FLOAT_TREE_DETAIL_LEGEND_FS
      TUP_TREE_SUMMARY_PAGE
      FLOAT_TREE_SUMMARY_LEGEND_FS
      INT_TREE_SPLIT_INDEX
      STR_BLOSUM_MATRIX
      STR_METRIC_BLOSUM
      STR_METRIC_IDENTITY
      STR_LINKAGE_AVERAGE
      STR_LINKAGE_COMPLETE
      STR_WEIGHTING_NONE
      STR_WEIGHTING_HENIKOFF
      STR_FILE_TREE_APP
      FLOAT_TREE_LOGO_CUTOFF
      FLOAT_TREE_LOGO_IC_FLOOR
      FLOAT_TREE_LOGO_IC_MAX
      INT_TREE_NAME_TRUNC
      STR_FILE_RESIDUE_DOT_APP
      STR_FILE_RESIDUE_DOT
      STR_RESIDUE_DOT_DEFAULT_AA
      INT_RESIDUE_DOT_MIN_ENCLOSE
      LIST_DOT_ALPHABET
      LIST_RESIDUE_DOT_KINASES
      INT_RESIDUE_DOT_MIN_SHARED
   
   

   
   
   .. rubric:: Functions

   .. autosummary::
      :toctree:
   
      _build_klifs_panel
      _repair_camkk1_pocket
      load_conservation_renderer
      rebuild_tree_from_data
   
   

   
   
   .. rubric:: Classes

   .. autosummary::
      :toctree:
      :template: custom-class-template.rst
   
      KLIFSConservationTreeFigure
      KLIFSDisplayLeaf
      KLIFSDisplaySplit
      KLIFSDisplayTree
      KLIFSHierarchicalConservation
      KLIFSResidueDotApp
      KLIFSTreeConservationApp
      _HandlerRoundedBox